BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G07SP1|AL426737
(734 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1136 839 0.0
3x_Contig1561 504 e-142
>3x_Contig1136
Length = 5035
Score = 839 bits (423), Expect = 0.0
Identities = 423/423 (100%)
Strand = Plus / Plus
Query: 1 gatctcttgaatatagttgtcaccttcttctcttgtgacagtggtttcgaaatatccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4613 gatctcttgaatatagttgtcaccttcttctcttgtgacagtggtttcgaaatatccttc 4672
Query: 61 caatgcatctgcgttgttgaactttcgcaaattcaaagatggtggtgtcaatttcaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4673 caatgcatctgcgttgttgaactttcgcaaattcaaagatggtggtgtcaatttcaattc 4732
Query: 121 tttcaattctttgctaaattgctcactaatcaaattgttctgcaagctgttttgattgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4733 tttcaattctttgctaaattgctcactaatcaaattgttctgcaagctgttttgattgaa 4792
Query: 181 agcaatttctttactgctggagttaaacttatttttaatagagtttctgtaagattttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4793 agcaatttctttactgctggagttaaacttatttttaatagagtttctgtaagattttgg 4852
Query: 241 attctgttcgtcagatggcacaaaagtcgcactatcaacacctttcttccagtagagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4853 attctgttcgtcagatggcacaaaagtcgcactatcaacacctttcttccagtagagttc 4912
Query: 301 taagactctctcggcaacgtcaaattctgctttaacaagaggtaactgatcaccgtgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4913 taagactctctcggcaacgtcaaattctgctttaacaagaggtaactgatcaccgtgaac 4972
Query: 361 tctcttttcaatacctaattcagggataaacacatcaaaagaagattcatatacttgcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4973 tctcttttcaatacctaattcagggataaacacatcaaaagaagattcatatacttgcaa 5032
Query: 421 aac 423
|||
Sbjct: 5033 aac 5035
>3x_Contig1561
Length = 10959
Score = 504 bits (254), Expect = e-142
Identities = 254/254 (100%)
Strand = Plus / Plus
Query: 481 gaggagtaaatggatagcctgttcctgtgcgtgatgtgcacaatcctttttgaaattaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggagtaaatggatagcctgttcctgtgcgtgatgtgcacaatcctttttgaaattaca 60
Query: 541 atattcagacgtgatttttaaagattcaatagtttctttatactctgtaccattaattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atattcagacgtgatttttaaagattcaatagtttctttatactctgtaccattaattat 120
Query: 601 gctcttcaactgcctatgaaccacatgatcagagtatcttctcaaaggagctgtgaaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctcttcaactgcctatgaaccacatgatcagagtatcttctcaaaggagctgtgaaatg 180
Query: 661 tgtgaacaatggcaaattcaatgaataatgcgcaaattggtcaggttcgactttaccaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgaacaatggcaaattcaatgaataatgcgcaaattggtcaggttcgactttaccaga 240
Query: 721 tatgaaatatttag 734
||||||||||||||
Sbjct: 241 tatgaaatatttag 254
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7051
Number of Sequences: 1807
Number of extensions: 7051
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 734
length of database: 10,358,551
effective HSP length: 16
effective length of query: 718
effective length of database: 10,329,639
effective search space: 7416680802
effective search space used: 7416680802
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)